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WormBase Tree Display for CDS: PPA29237

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Name Class

PPA29237SMapS_parentSequencePPA_ChrI
StructureSource_exons (54)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S278-9.50
DB_remarkcontains similarity to Interpro domains IPR036383 (Thrombospondin type-1 (TSP1) repeat superfamily), IPR016186 (C-type lectin-like/link domain superfamily), IPR000884 (Thrombospondin type-1 (TSP1) repeat), IPR016187 (C-type lectin fold)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00118791
Corresponding_transcriptPPA29237.1
Corresponding_proteinPP60797
Corresponding_oligo_setGPL14372_Probes_40890
GPL14372_Probes_40891
Microarray_resultsGPL14372_Probes_40890
GPL14372_Probes_40891
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S278-9.50Curator_confirmedWBPerson4055
Methodcurated