WormBase Tree Display for CDS: PPA29237
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PPA29237 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (54) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S278-9.50 | ||
DB_remark | contains similarity to Interpro domains IPR036383 (Thrombospondin type-1 (TSP1) repeat superfamily), IPR016186 (C-type lectin-like/link domain superfamily), IPR000884 (Thrombospondin type-1 (TSP1) repeat), IPR016187 (C-type lectin fold) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00118791 | ||||
Corresponding_transcript | PPA29237.1 | |||||
Corresponding_protein | PP60797 | |||||
Corresponding_oligo_set | GPL14372_Probes_40890 | |||||
GPL14372_Probes_40891 | ||||||
Microarray_results | GPL14372_Probes_40890 | |||||
GPL14372_Probes_40891 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S278-9.50 | Curator_confirmed | WBPerson4055 | |||
Method | curated |