WormBase Tree Display for CDS: PPA29266a
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| PPA29266a | Evidence | Curator_confirmed | WBPerson4055 | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | PPA_ChrI | |||
| Structure | Source_exons (46) | |||||
| DB_info | Database | pristionchus.org | cds | gene-UMM-S207-10.40 | ||
| DB_remark | PPA-RGR-1 protein; contains similarity to Pfam domain PF08638 (Mediator complex subunit MED14); contains similarity to Interpro domain IPR013947 (Mediator complex, subunit Med14) | |||||
| Origin | From_laboratory | RS | ||||
| Species | Pristionchus pacificus | |||||
| Properties | Coding | CDS | ||||
| CDS_predicted_by | pristionchus.org | |||||
| Prediction_status | Partially_confirmed | |||||
| Isoform | Curator_confirmed | WBPerson4055 | ||||
| Visible | Gene | WBGene00118820 | ||||
| Corresponding_transcript | PPA29266a.1 | |||||
| Corresponding_protein | PP75642 | |||||
| Corresponding_oligo_set | GPL14372_Probes_72180 | |||||
| GPL14372_Probes_72181 | ||||||
| GPL14372_Probes_72182 | ||||||
| GPL14372_Probes_72184 | ||||||
| GPL14372_Probes_72185 | ||||||
| GPL14372_Probes_72186 | ||||||
| Microarray_results | GPL14372_Probes_72180 | |||||
| GPL14372_Probes_72181 | ||||||
| GPL14372_Probes_72182 | ||||||
| GPL14372_Probes_72184 | ||||||
| GPL14372_Probes_72185 | ||||||
| GPL14372_Probes_72186 | ||||||
| RNASeq_FPKM | WBls:0000032 | 0.009961 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
| WBls:0000101 | 0.011688 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
| Last_reviewed | 23 Oct 2019 16:52:15 | WBPerson4055 | ||||
| Remark | [171116 mh6] renamed from gene-UMM-S207-10.40 | Curator_confirmed | WBPerson4055 | |||
| [191023 mh6] This CDS has been updated based on the RNAseq data. | Curator_confirmed | WBPerson4055 | ||||
| From_analysis | RNASeq | |||||
| Method | curated |
