WormBase Tree Display for CDS: PPA29343
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PPA29343 | SMap | S_parent | Sequence | PPA_ChrIV | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 43 | |||
88 | 230 | |||||
318 | 466 | |||||
530 | 649 | |||||
726 | 816 | |||||
860 | 957 | |||||
1072 | 1159 | |||||
1369 | 1495 | |||||
1614 | 1744 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2840-18.82 | ||
DB_remark | contains similarity to Pfam domain PF10326 (Serpentine type 7TM GPCR chemoreceptor Str); contains similarity to Interpro domain IPR019428 (7TM GPCR, serpentine receptor class r (Str)) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00118897 | ||||
Corresponding_transcript | PPA29343.1 | |||||
Corresponding_protein | PP71856 | |||||
Corresponding_oligo_set | GPL14372_Probes_58072 | |||||
GPL14372_Probes_58073 | ||||||
Microarray_results | GPL14372_Probes_58072 | |||||
GPL14372_Probes_58073 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S2840-18.82 | Curator_confirmed | WBPerson4055 | |||
Method | curated |