WormBase Tree Display for CDS: PPA29764
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PPA29764 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 253 | |||
527 | 595 | |||||
671 | 728 | |||||
2850 | 2931 | |||||
3202 | 3297 | |||||
3354 | 3404 | |||||
3495 | 3545 | |||||
3640 | 3683 | |||||
3872 | 3935 | |||||
4084 | 4194 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2844-51.44 | ||
DB_remark | contains similarity to Pfam domain PF00046 (Homeodomain); contains similarity to Interpro domains IPR001356 (Homeobox domain), IPR020479 (Homeobox domain, metazoa), IPR009057 (Homeobox-like domain superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00202633 | ||||
Corresponding_transcript | PPA29764.1 | |||||
Corresponding_protein | PP72010 | |||||
Corresponding_oligo_set | GPL14372_Probes_35247 | |||||
GPL14372_Probes_35248 | ||||||
GPL14372_Probes_35249 | ||||||
GPL14372_Probes_91413 | ||||||
GPL14372_Probes_91414 | ||||||
GPL14372_Probes_91415 | ||||||
GPL14372_Probes_91417 | ||||||
Microarray_results | GPL14372_Probes_35247 | |||||
GPL14372_Probes_35248 | ||||||
GPL14372_Probes_35249 | ||||||
GPL14372_Probes_91413 | ||||||
GPL14372_Probes_91414 | ||||||
GPL14372_Probes_91415 | ||||||
GPL14372_Probes_91417 | ||||||
RNASeq_FPKM | WBls:0000032 | 4.77474 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S2844-51.44 | Curator_confirmed | WBPerson4055 | |||
Method | curated |