WormBase Tree Display for CDS: PPA29879
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PPA29879 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 154 | |||
203 | 303 | |||||
350 | 442 | |||||
488 | 565 | |||||
618 | 680 | |||||
741 | 801 | |||||
2218 | 2324 | |||||
2930 | 3004 | |||||
3208 | 3345 | |||||
3604 | 3744 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMA-S57-17.7 | ||
DB_remark | PPA-REF-2 protein; contains similarity to Pfam domain PF00096 (Zinc finger, C2H2 type); contains similarity to Interpro domains IPR036236 (Zinc finger C2H2 superfamily), IPR013087 (Zinc finger C2H2-type) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00202748 | ||||
Corresponding_transcript | PPA29879.1 | |||||
Corresponding_protein | PP53613 | |||||
Corresponding_oligo_set | GPL14372_Probes_68310 | |||||
Microarray_results | GPL14372_Probes_68310 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMA-S57-17.7 | Curator_confirmed | WBPerson4055 | |||
Method | curated |