WormBase Tree Display for CDS: PPA30218

PPA30218 Evidence: Curator_confirmed: WBPerson4055
  SMap: S_parent: Sequence: PPA_ChrI
  Structure: Source_exons: 1 81
      313 393
      519 575
      1754 1852
      1972 2049
      2250 2411
      2539 2688
      3087 3241
      3354 3441
  DB_info: Database: pristionchus.org cds gene-UMM-S57-37.43
    DB_remark: contains similarity to Pfam domains PF01391 (Collagen triple helix repeat (20 copies)), PF01484 (Nematode cuticle collagen N-terminal domain); contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Partially_confirmed
  Visible: Gene: WBGene00203086
    Corresponding_transcript: PPA30218.1
    Corresponding_protein: PP75596
    Matching_cDNA: AW097243 Inferred_automatically: transcript_builder.pl
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 5.09732 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Last_reviewed: 08 Nov 2019 14:53:26 WBPerson4055
    Remark: [171116 mh6] renamed from gene-UMM-S57-37.43 Curator_confirmed: WBPerson4055
      [191108 mh6] This CDS has been updated based on the RNAseq data. Curator_confirmed: WBPerson4055
        From_analysis: RNASeq
  Method: curated