WormBase Tree Display for CDS: PPA30270
expand all nodes | collapse all nodes | view schema
PPA30270 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 1176 | |||
DB_info | Database | pristionchus.org | cds | gene-UMS-S259-5.61 | ||
DB_remark | contains similarity to Pfam domain PF00271 (Helicase conserved C-terminal domain); contains similarity to Interpro domains IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR001650 (Helicase, C-terminal domain-like) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00203138 | ||||
Corresponding_transcript | PPA30270.1 | |||||
Corresponding_protein | PP53696 | |||||
Corresponding_oligo_set | GPL14372_Probes_34416 | |||||
GPL14372_Probes_34417 | ||||||
GPL14372_Probes_34418 | ||||||
GPL14372_Probes_34419 | ||||||
GPL14372_Probes_34420 | ||||||
Microarray_results | GPL14372_Probes_34416 | |||||
GPL14372_Probes_34417 | ||||||
GPL14372_Probes_34418 | ||||||
GPL14372_Probes_34419 | ||||||
GPL14372_Probes_34420 | ||||||
RNASeq_FPKM | WBls:0000032 | 3.31792 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMS-S259-5.61 | Curator_confirmed | WBPerson4055 | |||
Method | curated |