WormBase Tree Display for CDS: PPA30824
expand all nodes | collapse all nodes | view schema
PPA30824 | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrII | |||
Structure | Source_exons (12) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S394-4.62 | ||
DB_remark | contains similarity to Interpro domain IPR016024 (Armadillo-type fold) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00203690 | ||||
Corresponding_transcript | PPA30824.1 | |||||
Corresponding_protein | PP74494 | |||||
Corresponding_oligo_set | GPL14372_Probes_32957 | |||||
GPL14372_Probes_32958 | ||||||
Matching_cDNA | FG102012 | Inferred_automatically | transcript_builder.pl | |||
FG104411 | Inferred_automatically | transcript_builder.pl | ||||
Microarray_results | GPL14372_Probes_32957 | |||||
GPL14372_Probes_32958 | ||||||
RNASeq_FPKM | WBls:0000032 | 33.0594 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 52.0589 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 21 Feb 2019 09:55:49 | WBPerson4055 | ||||
Remark | [171116 mh6] renamed from gene-UMM-S394-4.62 | Curator_confirmed | WBPerson4055 | |||
[190221 mh6] updated to the latest set provided my MPG | Curator_confirmed | WBPerson18244 | ||||
Method | curated |