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WormBase Tree Display for CDS: PPA31083

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Name Class

PPA31083SMapS_parentSequencePPA_ChrII
StructureSource_exons (15)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S273-4.24
DB_remarkPPA-CEH-38 protein; contains similarity to Pfam domains PF00046 (Homeodomain), PF02376 (CUT domain); contains similarity to Interpro domains IPR003350 (CUT domain), IPR001356 (Homeobox domain), IPR010982 (Lambda repressor-like, DNA-binding domain superfamily), IPR009057 (Homeobox-like domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00203948
Corresponding_transcriptPPA31083.1
Corresponding_proteinPP57357
Corresponding_oligo_setGPL14372_Probes_25302
GPL14372_Probes_25304
GPL14372_Probes_25305
GPL14372_Probes_25306
Microarray_resultsGPL14372_Probes_25302
GPL14372_Probes_25304
GPL14372_Probes_25305
GPL14372_Probes_25306
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S273-4.24Curator_confirmedWBPerson4055
Methodcurated