WormBase Tree Display for CDS: PPA31658
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PPA31658 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 158 | |||
216 | 300 | |||||
349 | 414 | |||||
461 | 576 | |||||
623 | 764 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMA-S57-19.36 | ||
DB_remark | PPA-SPCS-3 protein; contains similarity to Pfam domain PF04573 (Signal peptidase subunit); contains similarity to Interpro domain IPR007653 (Signal peptidase complex subunit 3) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00204522 | ||||
Corresponding_transcript | PPA31658.1 | |||||
Corresponding_protein | PP57008 | |||||
RNASeq_FPKM | WBls:0000032 | 53.1761 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 94.2449 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMA-S57-19.36 | Curator_confirmed | WBPerson4055 | |||
Method | curated |