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WormBase Tree Display for CDS: PPA32231

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Name Class

PPA32231SMapS_parentSequencePPA_ChrI
StructureSource_exons1168
278339
38724026
41594263
44014470
45514663
48885096
DB_infoDatabasepristionchus.orgcdsgene-UMM-S139-7.29
DB_remarkPPA-HST-3.2 protein; contains similarity to Pfam domain PF00685 (Sulfotransferase domain); contains similarity to Interpro domains IPR000863 (Sulfotransferase domain), IPR027417 (P-loop containing nucleoside triphosphate hydrolase), IPR037359 (Heparan sulfate sulfotransferase)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00205092
Corresponding_transcriptPPA32231.1
Corresponding_proteinPP59253
Corresponding_oligo_setGPL14372_Probes_33932
GPL14372_Probes_33933
GPL14372_Probes_46348
GPL14372_Probes_46349
GPL14372_Probes_46350
GPL14372_Probes_46351
Microarray_resultsGPL14372_Probes_33932
GPL14372_Probes_33933
GPL14372_Probes_46348
GPL14372_Probes_46349
GPL14372_Probes_46350
GPL14372_Probes_46351
RNASeq_FPKMWBls:00000324.75366From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001015.61515From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S139-7.29Curator_confirmedWBPerson4055
Methodcurated