WormBase Tree Display for CDS: PPA32883
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| PPA32883 | SMap | S_parent | Sequence | PPA_ChrII | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons (19) | |||||
| DB_info | Database | pristionchus.org | cds | gene-UMM-S394-4.69 | ||
| DB_remark | PPA-ALFA-1 protein; contains similarity to Pfam domain PF15019 (C9orf72-like protein family); contains similarity to Interpro domain IPR027819 (Guanine nucleotide exchange factor C9orf72) | |||||
| Origin | From_laboratory | RS | ||||
| Species | Pristionchus pacificus | |||||
| Properties | Coding | CDS | ||||
| CDS_predicted_by | pristionchus.org | |||||
| Prediction_status | Predicted | |||||
| Start_not_found | 1 | |||||
| Visible | Gene | WBGene00205743 | ||||
| Corresponding_transcript | PPA32883.1 | |||||
| Corresponding_protein | PP59836 | |||||
| RNASeq_FPKM | WBls:0000032 | 3.43694 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
| WBls:0000101 | 4.059 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
| Remark | [171116 mh6] renamed from gene-UMM-S394-4.69 | Curator_confirmed | WBPerson4055 | |||
| Method | curated |
