WormBase Tree Display for CDS: PPA33143
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PPA33143 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 70 | |||
284 | 356 | |||||
402 | 480 | |||||
534 | 626 | |||||
670 | 717 | |||||
783 | 897 | |||||
950 | 1008 | |||||
1055 | 1213 | |||||
1258 | 1374 | |||||
1419 | 1511 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S71-18.92 | ||
DB_remark | contains similarity to Pfam domain PF03490 (); contains similarity to Interpro domains IPR000909 (Phosphatidylinositol-specific phospholipase C, X domain), IPR003633 (), IPR017946 (PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00206003 | ||||
Corresponding_transcript | PPA33143.1 | |||||
Corresponding_protein | PP64293 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 16.2705 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S71-18.92 | Curator_confirmed | WBPerson4055 | |||
Method | curated |