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WormBase Tree Display for CDS: PPA33251

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Name Class

PPA33251SMapS_parentSequencePPA_ChrIV
StructureSource_exons (20)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S2840-46.66
DB_remarkcontains similarity to Pfam domains PF00060 (Ligand-gated ion channel), PF10613 (Ligated ion channel L-glutamate- and glycine-binding site); contains similarity to Interpro domains IPR001320 (Ionotropic glutamate receptor, C-terminal), IPR001508 (Ionotropic glutamate receptor, metazoa), IPR019594 (Ionotropic glutamate receptor, L-glutamate and glycine-binding domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00206111
Corresponding_transcriptPPA33251.1
Corresponding_proteinPP53692
Corresponding_oligo_setGPL14372_Probes_6839
GPL14372_Probes_6841
GPL14372_Probes_6842
GPL14372_Probes_6843
Microarray_resultsGPL14372_Probes_6839
GPL14372_Probes_6841
GPL14372_Probes_6842
GPL14372_Probes_6843
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S2840-46.66Curator_confirmedWBPerson4055
Methodcurated