WormBase Tree Display for CDS: PPA33257
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PPA33257 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 123 | |||
249 | 343 | |||||
1019 | 1154 | |||||
1292 | 1336 | |||||
1492 | 1536 | |||||
1641 | 1699 | |||||
1838 | 1946 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S273-12.13 | ||
DB_remark | contains similarity to Pfam domain PF00778 (DIX domain); contains similarity to Interpro domains IPR038207 (DIX domain superfamily), IPR029071 (Ubiquitin-like domain superfamily), IPR001158 (DIX domain), IPR015506 (Dishevelled-related protein) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00206117 | ||||
Corresponding_transcript | PPA33257.1 | |||||
Corresponding_protein | PP58486 | |||||
Corresponding_oligo_set | GPL14372_Probes_25473 | |||||
Microarray_results | GPL14372_Probes_25473 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S273-12.13 | Curator_confirmed | WBPerson4055 | |||
Method | curated |