WormBase Tree Display for CDS: PPA33331
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PPA33331 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrX | |||
Structure | Source_exons | 1 | 603 | |||
650 | 831 | |||||
874 | 1075 | |||||
1117 | 1416 | |||||
1508 | 1675 | |||||
1722 | 1853 | |||||
1920 | 2051 | |||||
2100 | 2323 | |||||
2377 | 2557 | |||||
2695 | 2892 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2857-6.1 | ||
DB_remark | PPA-ARRD-28 protein; contains similarity to Interpro domain IPR011022 (Arrestin C-terminal-like domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00206191 | ||||
Corresponding_transcript | PPA33331.1 | |||||
Corresponding_protein | PP29594 | |||||
Corresponding_oligo_set | GPL14372_Probes_24046 | |||||
GPL14372_Probes_24047 | ||||||
GPL14372_Probes_24048 | ||||||
GPL14372_Probes_24049 | ||||||
GPL14372_Probes_24050 | ||||||
Microarray_results | GPL14372_Probes_24046 | |||||
GPL14372_Probes_24047 | ||||||
GPL14372_Probes_24048 | ||||||
GPL14372_Probes_24049 | ||||||
GPL14372_Probes_24050 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S2857-6.1 | Curator_confirmed | WBPerson4055 | |||
Method | curated |