WormBase Tree Display for CDS: PPA33370
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PPA33370 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 15 | |||
61 | 203 | |||||
248 | 329 | |||||
375 | 799 | |||||
845 | 933 | |||||
978 | 1075 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMS-S196-24.36 | ||
DB_remark | contains similarity to Pfam domain PF13499 (EF-hand domain pair); contains similarity to Interpro domains IPR002048 (EF-hand domain), IPR011992 (EF-hand domain pair) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00206230 | ||||
Corresponding_transcript | PPA33370.1 | |||||
Corresponding_protein | PP73233 | |||||
Corresponding_oligo_set | GPL14372_Probes_37085 | |||||
GPL14372_Probes_37087 | ||||||
GPL14372_Probes_37088 | ||||||
Microarray_results | GPL14372_Probes_37085 | |||||
GPL14372_Probes_37087 | ||||||
GPL14372_Probes_37088 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMS-S196-24.36 | Curator_confirmed | WBPerson4055 | |||
Method | curated |