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WormBase Tree Display for CDS: PPA33533

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Name Class

PPA33533SMapS_parentSequencePPA_ChrI
StructureSource_exons11577
17942649
54105567
57336903
DB_infoDatabasepristionchus.orgcdsgene-UMA-S7-58.7
DB_remarkcontains similarity to Pfam domain PF13975 (gag-polyprotein putative aspartyl protease); contains similarity to Interpro domain IPR021109 (Aspartic peptidase domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00271902
Corresponding_transcriptPPA33533.1
Corresponding_proteinPP58537
Corresponding_oligo_setGPL14372_Probes_21866
GPL14372_Probes_31291
GPL14372_Probes_34053
GPL14372_Probes_34054
GPL14372_Probes_34695
GPL14372_Probes_35208
Microarray_resultsGPL14372_Probes_21866
GPL14372_Probes_31291
GPL14372_Probes_34053
GPL14372_Probes_34054
GPL14372_Probes_34695
GPL14372_Probes_35208
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated