WormBase Tree Display for CDS: PPA33535

PPA33535 SMap: S_parent: Sequence: PPA_ChrI
  Structure: Source_exons: 1 145
      363 522
      601 718
      977 1069
      1172 1630
      2076 2117
      2215 2277
      2562 2687
      2920 3034
      3208 3296
  DB_info: Database: pristionchus.org cds gene-UMA-S7-63.30
    DB_remark: contains similarity to Pfam domains PF00076 (RNA recognition motif), PF00883 (Cytosol aminopeptidase family, catalytic domain), PF14634 (zinc-RING finger domain); contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR000819 (Peptidase M17, leucyl aminopeptidase, C-terminal), IPR035979 (RNA-binding domain superfamily), IPR011356 (Peptidase M17, leucine aminopeptidase/peptidase B), IPR013083 (Zinc finger, RING/FYVE/PHD-type), IPR012677 (Nucleotide-binding alpha-beta plait domain superfamily), IPR000504 (RNA recognition motif domain)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Predicted
  Visible: Gene: WBGene00271904
    Corresponding_transcript: PPA33535.1
    Corresponding_protein: PP74075
    Corresponding_oligo_set: GPL14372_Probes_8758
    Microarray_results: GPL14372_Probes_8758
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 47.3886 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
  Method: curated