WormBase Tree Display for CDS: PPA33537
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| PPA33537 | SMap | S_parent | Sequence | PPA_ChrI | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 3 | |||
| 48 | 338 | |||||
| 996 | 1079 | |||||
| 1244 | 1368 | |||||
| 1478 | 1589 | |||||
| DB_info | Database | pristionchus.org | cds | gene-UMA-S7-68.27 | ||
| DB_remark | contains similarity to Pfam domain PF01090 (Ribosomal protein S19e); contains similarity to Interpro domains IPR038111 (), IPR021109 (Aspartic peptidase domain superfamily), IPR036390 (Winged helix DNA-binding domain superfamily), IPR001266 (Small ribosomal subunit protein eS19) | |||||
| Origin | From_laboratory | RS | ||||
| Species | Pristionchus pacificus | |||||
| Properties | Coding | CDS | ||||
| CDS_predicted_by | pristionchus.org | |||||
| Prediction_status | Predicted | |||||
| Visible | Gene | WBGene00271906 | ||||
| Corresponding_transcript | PPA33537.1 | |||||
| Corresponding_protein | PP57430 | |||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
| Method | curated |
