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WormBase Tree Display for CDS: PPA33609

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Name Class

PPA33609SMapS_parentSequencePPA_ChrII
StructureSource_exons163
148360
DB_infoDatabasepristionchus.orgcdsgene-UMA-S10-64.14
DB_remarkcontains similarity to Pfam domain PF11976 (Ubiquitin-2 like Rad60 SUMO-like); contains similarity to Interpro domains IPR029071 (Ubiquitin-like domain superfamily), IPR022617 (Rad60/SUMO-like domain), IPR000626 (Ubiquitin-like domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00271978
Corresponding_transcriptPPA33609.1
Corresponding_proteinPP15964
Matching_cDNABM566429Inferred_automaticallytranscript_builder.pl
RNASeq_FPKMWBls:000003240.1324From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010147.5102From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated