WormBase Tree Display for CDS: PPA33726
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PPA33726 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 121 | |||
621 | 748 | |||||
859 | 879 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMA-S41-67.46 | ||
DB_remark | contains similarity to Pfam domain PF00164 (Ribosomal protein S12/S23); contains similarity to Interpro domains IPR006032 (Small ribosomal subunit protein uS12), IPR012340 (Nucleic acid-binding, OB-fold) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00272095 | ||||
Corresponding_transcript | PPA33726.1 | |||||
Corresponding_protein | PP52517 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |