WormBase Tree Display for CDS: PPA33855

PPA33855 SMap: S_parent: Sequence: PPA_ChrI
  Structure: Source_exons (37)
  DB_info: Database: pristionchus.org cds gene-UMA-S71-10.11
    DB_remark: PPA-SUT-2 protein; contains similarity to Pfam domains PF01344 (Kelch motif), PF01480 (PWI domain), PF14608 (RNA-binding, Nab2-type zinc finger); contains similarity to Interpro domains IPR040366 (Nuclear polyadenylated RNA-binding protein Nab2/ZC3H14), IPR002483 (PWI domain), IPR000571 (Zinc finger, CCCH-type), IPR006652 (Kelch repeat type 1), IPR015915 (Kelch-type beta propeller)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Partially_confirmed
  Visible: Gene: WBGene00272224
    Corresponding_transcript: PPA33855.1
    Corresponding_protein: PP57183
    Corresponding_oligo_set: GPL14372_Probes_49397
      GPL14372_Probes_49398
      GPL14372_Probes_49400
      GPL14372_Probes_49402
    Matching_cDNA: BM812310 Inferred_automatically: transcript_builder.pl
      FE937228 Inferred_automatically: transcript_builder.pl
      BM565984 Inferred_automatically: transcript_builder.pl
    Microarray_results: GPL14372_Probes_49397
      GPL14372_Probes_49398
      GPL14372_Probes_49400
      GPL14372_Probes_49402
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 11.3975 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
  Method: curated