WormBase Tree Display for CDS: PPA33905
expand all nodes | collapse all nodes | view schema
PPA33905 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 9 | |||
382 | 639 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMA-S139-25.57 | ||
DB_remark | contains similarity to Pfam domain PF00125 (Core histone H2A/H2B/H3/H4); contains similarity to Interpro domains IPR000164 (Histone H3/CENP-A), IPR009072 (Histone-fold), IPR007125 (Histone H2A/H2B/H3) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00272274 | ||||
Corresponding_transcript | PPA33905.1 | |||||
Corresponding_protein | PP53884 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |