WormBase Tree Display for CDS: PPA33906
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PPA33906 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 312 | |||
DB_info | Database | pristionchus.org | cds | gene-UMA-S139-25.58 | ||
DB_remark | PPA-HIS-28 protein; contains similarity to Pfam domain PF15511 (Centromere kinetochore component CENP-T histone fold); contains similarity to Interpro domains IPR009072 (Histone-fold), IPR001951 (Histone H4), IPR035425 (CENP-T/Histone H4, histone fold) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00272275 | ||||
Corresponding_transcript | PPA33906.1 | |||||
Corresponding_protein | PP26089 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |