WormBase Tree Display for CDS: PPA33963
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| PPA33963 | SMap | S_parent | Sequence | PPA_ChrII | ||
|---|---|---|---|---|---|---|
| Structure | Source_exons | 1 | 2049 | |||
| 2138 | 2223 | |||||
| 2316 | 2439 | |||||
| DB_info | Database | pristionchus.org | cds | gene-UMA-S245-3.66 | ||
| DB_remark | contains similarity to Pfam domains PF13087 (AAA domain), PF13245 (AAA domain); contains similarity to Interpro domains IPR041679 (DNA2/NAM7 helicase-like, C-terminal), IPR027417 (P-loop containing nucleoside triphosphate hydrolase) | |||||
| Origin | From_laboratory | RS | ||||
| Species | Pristionchus pacificus | |||||
| Properties | Coding | CDS | ||||
| CDS_predicted_by | pristionchus.org | |||||
| Prediction_status | Predicted | |||||
| Visible | Gene | WBGene00272332 | ||||
| Corresponding_transcript | PPA33963.1 | |||||
| Corresponding_protein | PP21901 | |||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
| Method | curated |
