WormBase Tree Display for CDS: PPA34114

PPA34114 Evidence: Curator_confirmed: WBPerson4055
  SMap: S_parent: Sequence: PPA_ChrI
  Structure: Source_exons: 2 86
      154 212
      288 372
      516 574
      622 700
      1260 1387
      1496 1591
  DB_info: Database: pristionchus.org cds gene-UMA-S473-1.3
    DB_remark: contains similarity to Pfam domain PF00090 (Thrombospondin type 1 domain); contains similarity to Interpro domains IPR036383 (Thrombospondin type-1 (TSP1) repeat superfamily), IPR000884 (Thrombospondin type-1 (TSP1) repeat)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Confirmed
    Start_not_found: 1
  Visible: Gene: WBGene00272483
    Corresponding_transcript: PPA34114.1
    Corresponding_protein: PP74951
    Corresponding_oligo_set: GPL14372_Probes_63410
      GPL14372_Probes_63411
      GPL14372_Probes_63412
    Matching_cDNA: FE932930 Inferred_automatically: transcript_builder.pl
    Microarray_results: GPL14372_Probes_63410
      GPL14372_Probes_63411
      GPL14372_Probes_63412
    RNASeq_FPKM: WBls:0000032 40.7363 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 115.511 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Last_reviewed: 21 Feb 2019 09:56:35 WBPerson4055
    Remark: [190221 mh6] updated to the latest set provided my MPG Curator_confirmed: WBPerson18244
  Method: curated