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WormBase Tree Display for CDS: PPA34314

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Name Class

PPA34314SMapS_parentSequencePPA_ChrIV
StructureSource_exons1100
811901
9871161
12331444
15271795
19382026
21202317
23892457
27382917
29732984
DB_infoDatabasepristionchus.orgcdsgene-UMA-S2840-103.104
DB_remarkcontains similarity to Pfam domain PF00012 (Hsp70 protein); contains similarity to Interpro domains IPR029048 (Heat shock protein 70kD, C-terminal domain superfamily), IPR029047 (Heat shock protein 70kD, peptide-binding domain superfamily), IPR013126 (Heat shock protein 70 family), IPR043129 (ATPase, nucleotide binding domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00272683
Corresponding_transcriptPPA34314.1
Corresponding_proteinPP51966
Corresponding_oligo_setGPL14372_Probes_30134
Matching_cDNABI773608Inferred_automaticallytranscript_builder.pl
FE941597Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_30134
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated