WormBase Tree Display for CDS: PPA34324
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PPA34324 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 108 | |||
603 | 683 | |||||
2269 | 2324 | |||||
2872 | 2943 | |||||
3267 | 3342 | |||||
4205 | 4279 | |||||
9072 | 9143 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMA-S2844-5.10 | ||
DB_remark | contains similarity to Pfam domain PF07890 (Rrp15p); contains similarity to Interpro domain IPR012459 (Ribosomal RNA-processing protein 15) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00272693 | ||||
Corresponding_transcript | PPA34324.1 | |||||
Corresponding_protein | PP72434 | |||||
RNASeq_FPKM | WBls:0000032 | 9.57187 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 45.2405 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |