WormBase Tree Display for CDS: PPA34325
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PPA34325 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (11) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMA-S2844-7.0 | ||
DB_remark | PPA-PQN-51 protein; contains similarity to Pfam domain PF03153 (Transcription factor IIA, alpha/beta subunit); contains similarity to Interpro domains IPR009088 (Transcription factor IIA, beta-barrel), IPR004855 (Transcription factor IIA, alpha/beta subunit) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00272694 | ||||
Corresponding_transcript | PPA34325.1 | |||||
Corresponding_protein | PP65205 | |||||
Corresponding_oligo_set | GPL14372_Probes_26297 | |||||
GPL14372_Probes_26298 | ||||||
GPL14372_Probes_26299 | ||||||
Microarray_results | GPL14372_Probes_26297 | |||||
GPL14372_Probes_26298 | ||||||
GPL14372_Probes_26299 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |