WormBase Tree Display for CDS: PPA34343
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PPA34343 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 46 | |||
92 | 234 | |||||
323 | 382 | |||||
425 | 594 | |||||
643 | 787 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMA-S2844-31.40 | ||
DB_remark | contains similarity to Pfam domain PF10326 (Serpentine type 7TM GPCR chemoreceptor Str); contains similarity to Interpro domains IPR019423 (7TM GPCR, serpentine receptor class j (Srj)), IPR019428 (7TM GPCR, serpentine receptor class r (Str)) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00272712 | ||||
Corresponding_transcript | PPA34343.1 | |||||
Corresponding_protein | PP61201 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |