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WormBase Tree Display for CDS: PPA34521

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Name Class

PPA34521SMapS_parentSequencePPA_ChrI
StructureSource_exons (23)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S7-3.12
DB_remarkcontains similarity to Pfam domain PF00057 (Low-density lipoprotein receptor domain class A); contains similarity to Interpro domains IPR036055 (LDL receptor-like superfamily), IPR002172 (Low-density lipoprotein (LDL) receptor class A repeat), IPR002557 (Chitin binding domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00272890
Corresponding_transcriptPPA34521.1
Corresponding_proteinPP65443
Corresponding_oligo_setGPL14372_Probes_35482
GPL14372_Probes_35483
GPL14372_Probes_35484
Microarray_resultsGPL14372_Probes_35482
GPL14372_Probes_35483
GPL14372_Probes_35484
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001011.74531From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated