WormBase Tree Display for CDS: PPA34532
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PPA34532 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 61 | |||
231 | 321 | |||||
486 | 600 | |||||
1515 | 1580 | |||||
1766 | 1841 | |||||
1890 | 2005 | |||||
2486 | 2608 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S7-5.22 | ||
DB_remark | contains similarity to Pfam domain PF00828 (Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A); contains similarity to Interpro domains IPR021131 (Large ribosomal subunit protein uL15/eL18), IPR036227 (Large ribosomal subunit protein uL15/eL18 superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00272901 | ||||
Corresponding_transcript | PPA34532.1 | |||||
Corresponding_protein | PP65631 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |