WormBase Tree Display for CDS: PPA34579
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PPA34579 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 33 | |||
126 | 206 | |||||
282 | 395 | |||||
511 | 726 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S7-14.57 | ||
DB_remark | contains similarity to Pfam domain PF00646 (F-box domain); contains similarity to Interpro domains IPR036047 (F-box-like domain superfamily), IPR001810 (F-box domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00272948 | ||||
Corresponding_transcript | PPA34579.1 | |||||
Corresponding_protein | PP65871 | |||||
Corresponding_oligo_set | GPL14372_Probes_35639 | |||||
GPL14372_Probes_35640 | ||||||
Microarray_results | GPL14372_Probes_35639 | |||||
GPL14372_Probes_35640 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 31.623 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |