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WormBase Tree Display for CDS: PPA34598

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Name Class

PPA34598SMapS_parentSequencePPA_ChrI
StructureSource_exons181
395523
678761
907967
10321172
12351653
18172056
DB_infoDatabasepristionchus.orgcdsgene-UMM-S7-18.9
DB_remarkcontains similarity to Pfam domain PF01484 (Nematode cuticle collagen N-terminal domain); contains similarity to Interpro domain IPR002486 (Nematode cuticle collagen, N-terminal)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00272967
Corresponding_transcriptPPA34598.1
Corresponding_proteinPP66252
Corresponding_oligo_setGPL14372_Probes_35743
Matching_cDNABI500368Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_35743
RNASeq_FPKMWBls:00000323.39108From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001018.01055From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated