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WormBase Tree Display for CDS: PPA34601

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Name Class

PPA34601SMapS_parentSequencePPA_ChrI
StructureSource_exons (32)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S7-18.48
DB_remarkcontains similarity to Pfam domains PF04685 (Glycosyl-hydrolase family 116, catalytic region), PF12215 (beta-glucosidase 2, glycosyl-hydrolase family 116 N-term); contains similarity to Interpro domains IPR006775 (Glycosyl-hydrolase family 116, catalytic region), IPR014551 (Beta-glucosidase GBA2-type), IPR024462 (Glycosyl-hydrolase family 116, N-terminal), IPR008928 (Six-hairpin glycosidase superfamily), IPR012341 (Six-hairpin glycosidase-like superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00272970
Corresponding_transcriptPPA34601.1
Corresponding_proteinPP06526
RNASeq_FPKMWBls:000003218.1178From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001014.93765From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated