WormBase Tree Display for CDS: PPA34610
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PPA34610 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (13) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S7-20.13 | ||
DB_remark | PPA-DHRS-4.1 protein; contains similarity to Pfam domain PF13561 (Enoyl-(Acyl carrier protein) reductase); contains similarity to Interpro domains IPR036291 (NAD(P)-binding domain superfamily), IPR002347 (Short-chain dehydrogenase/reductase SDR) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00272979 | ||||
Corresponding_transcript | PPA34610.1 | |||||
Corresponding_protein | PP65083 | |||||
Corresponding_oligo_set | GPL14372_Probes_35310 | |||||
GPL14372_Probes_35311 | ||||||
GPL14372_Probes_35312 | ||||||
Matching_cDNA | FG096576 | Inferred_automatically | transcript_builder.pl | |||
FG095461 | Inferred_automatically | transcript_builder.pl | ||||
Microarray_results | GPL14372_Probes_35310 | |||||
GPL14372_Probes_35311 | ||||||
GPL14372_Probes_35312 | ||||||
RNASeq_FPKM | WBls:0000032 | 26.8826 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 9.52505 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |