WormBase Tree Display for CDS: PPA34626
expand all nodes | collapse all nodes | view schema
PPA34626 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 48 | |||
123 | 249 | |||||
347 | 710 | |||||
824 | 908 | |||||
998 | 1099 | |||||
1220 | 1276 | |||||
1350 | 1487 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S7-23.24 | ||
DB_remark | contains similarity to Pfam domain PF13920 (Zinc finger, C3HC4 type (RING finger)); contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR013083 (Zinc finger, RING/FYVE/PHD-type) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00272995 | ||||
Corresponding_transcript | PPA34626.1 | |||||
Corresponding_protein | PP37882 | |||||
Corresponding_oligo_set | GPL14372_Probes_35834 | |||||
Microarray_results | GPL14372_Probes_35834 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |