WormBase Tree Display for CDS: PPA34675
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PPA34675 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (25) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S7-31.51 | ||
DB_remark | contains similarity to Pfam domains PF04083 (Partial alpha/beta-hydrolase lipase region), PF10323 (Serpentine type 7TM GPCR chemoreceptor Srv); contains similarity to Interpro domains IPR029058 (Alpha/Beta hydrolase fold), IPR019426 (7TM GPCR, serpentine receptor class v (Srv)), IPR006693 (Partial AB-hydrolase lipase domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00273044 | ||||
Corresponding_transcript | PPA34675.1 | |||||
Corresponding_protein | PP64074 | |||||
Corresponding_oligo_set | GPL14372_Probes_36012 | |||||
GPL14372_Probes_36013 | ||||||
GPL14372_Probes_36014 | ||||||
GPL14372_Probes_36015 | ||||||
Microarray_results | GPL14372_Probes_36012 | |||||
GPL14372_Probes_36013 | ||||||
GPL14372_Probes_36014 | ||||||
GPL14372_Probes_36015 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 3.50022 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |