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WormBase Tree Display for CDS: PPA34684

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Name Class

PPA34684SMapS_parentSequencePPA_ChrI
StructureSource_exons (16)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S7-32.46
DB_remarkcontains similarity to Pfam domains PF00725 (3-hydroxyacyl-CoA dehydrogenase, C-terminal domain), PF02737 (3-hydroxyacyl-CoA dehydrogenase, NAD binding domain); contains similarity to Interpro domains IPR036291 (NAD(P)-binding domain superfamily), IPR008927 (6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily), IPR006108 (3-hydroxyacyl-CoA dehydrogenase, C-terminal), IPR006176 (3-hydroxyacyl-CoA dehydrogenase, NAD binding)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
Start_not_found1
VisibleGeneWBGene00273053
Corresponding_transcriptPPA34684.1
Corresponding_proteinPP62414
Corresponding_oligo_setGPL14372_Probes_35349
GPL14372_Probes_35350
GPL14372_Probes_35351
GPL14372_Probes_35353
Microarray_resultsGPL14372_Probes_35349
GPL14372_Probes_35350
GPL14372_Probes_35351
GPL14372_Probes_35353
RNASeq_FPKMWBls:000003238.0857From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010134.602From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated