Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: PPA34710

expand all nodes | collapse all nodes | view schema

Name Class

PPA34710SMapS_parentSequencePPA_ChrI
StructureSource_exons (18)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S7-35.16
DB_remarkPPA-CCT-7 protein; contains similarity to Pfam domain PF00118 (TCP-1/cpn60 chaperonin family); contains similarity to Interpro domains IPR012720 (T-complex protein 1, eta subunit), IPR027410 (TCP-1-like chaperonin intermediate domain superfamily), IPR027413 (GroEL-like equatorial domain superfamily), IPR017998 (Chaperone tailless complex polypeptide 1 (TCP-1)), IPR027409 (GroEL-like apical domain superfamily), IPR002423 (Chaperonin Cpn60/GroEL/TCP-1 family)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00273079
Corresponding_transcriptPPA34710.1
Corresponding_proteinPP57314
Corresponding_oligo_setGPL14372_Probes_35385
Matching_cDNAAW115016Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_35385
RNASeq_FPKMWBls:000003218.3063From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated