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WormBase Tree Display for CDS: PPA34725

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Name Class

PPA34725SMapS_parentSequencePPA_ChrI
StructureSource_exons1441
541561
606752
12591393
17311894
23242413
29643054
38373935
DB_infoDatabasepristionchus.orgcdsgene-UMM-S7-38.33
DB_remarkPPA-DLAT-1 protein; contains similarity to Pfam domains PF00198 (2-oxoacid dehydrogenases acyltransferase (catalytic domain)), PF02817 (e3 binding domain); contains similarity to Interpro domains IPR004167 (Peripheral subunit-binding domain), IPR036625 (E3-binding domain superfamily), IPR001078 (2-oxoacid dehydrogenase acyltransferase, catalytic domain), IPR023213 (Chloramphenicol acetyltransferase-like domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00273094
Corresponding_transcriptPPA34725.1
Corresponding_proteinPP71992
Matching_cDNAFE939883Inferred_automaticallytranscript_builder.pl
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated