WormBase Tree Display for CDS: PPA34753
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PPA34753 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 54 | |||
162 | 191 | |||||
250 | 317 | |||||
383 | 494 | |||||
570 | 647 | |||||
707 | 775 | |||||
821 | 904 | |||||
1005 | 1176 | |||||
1285 | 1482 | |||||
1534 | 1664 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S7-41.15 | ||
DB_remark | contains similarity to Pfam domain PF00096 (Zinc finger, C2H2 type); contains similarity to Interpro domains IPR036236 (Zinc finger C2H2 superfamily), IPR013087 (Zinc finger C2H2-type) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00273122 | ||||
Corresponding_transcript | PPA34753.1 | |||||
Corresponding_protein | PP72912 | |||||
Corresponding_oligo_set | GPL14372_Probes_867 | |||||
GPL14372_Probes_868 | ||||||
GPL14372_Probes_870 | ||||||
GPL14372_Probes_871 | ||||||
Microarray_results | GPL14372_Probes_867 | |||||
GPL14372_Probes_868 | ||||||
GPL14372_Probes_870 | ||||||
GPL14372_Probes_871 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |