WormBase Tree Display for CDS: PPA34782
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PPA34782 | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrI | |||
Structure | Source_exons | 1 | 128 | |||
177 | 261 | |||||
429 | 583 | |||||
690 | 816 | |||||
871 | 1001 | |||||
1073 | 1138 | |||||
1219 | 1301 | |||||
1366 | 1457 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S7-43.52 | ||
DB_remark | contains similarity to Pfam domain PF03015 (Male sterility protein); contains similarity to Interpro domains IPR033640 (Fatty acyl-CoA reductase, C-terminal), IPR026055 (Fatty acyl-CoA reductase) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00273151 | ||||
Corresponding_transcript | PPA34782.1 | |||||
Corresponding_protein | PP75039 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 04 Jul 2019 11:19:02 | WBPerson4055 | ||||
Remark | [190704 mh6] This CDS has been updated based on the RNAseq data. | Curator_confirmed | WBPerson4055 | |||
From_analysis | RNASeq | |||||
Method | curated |