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WormBase Tree Display for CDS: PPA34783

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Name Class

PPA34783SMapS_parentSequencePPA_ChrI
StructureSource_exons (37)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S7-44.9
DB_remarkcontains similarity to Pfam domains PF00520 (Ion transport protein), PF12796 (Ankyrin repeats (3 copies)), PF13606 (Ankyrin repeat); contains similarity to Interpro domains IPR024862 (Transient receptor potential cation channel subfamily V), IPR002110 (Ankyrin repeat), IPR020683 (Domain of unknown function DUF3447), IPR005821 (Ion transport domain), IPR036770 (Ankyrin repeat-containing domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00273152
Corresponding_transcriptPPA34783.1
Corresponding_proteinPP52928
Corresponding_oligo_setGPL14372_Probes_36229
GPL14372_Probes_36230
GPL14372_Probes_36231
Microarray_resultsGPL14372_Probes_36229
GPL14372_Probes_36230
GPL14372_Probes_36231
RNASeq_FPKMWBls:000003210.8039From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated