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WormBase Tree Display for CDS: PPA34820

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Name Class

PPA34820SMapS_parentSequencePPA_ChrI
StructureSource_exons1108
476602
6811303
DB_infoDatabasepristionchus.orgcdsgene-UMM-S7-50.33
DB_remarkcontains similarity to Pfam domain PF01484 (Nematode cuticle collagen N-terminal domain); contains similarity to Interpro domain IPR002486 (Nematode cuticle collagen, N-terminal)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusConfirmed
VisibleGeneWBGene00273189
Corresponding_transcriptPPA34820.1
Corresponding_proteinPP10811
Corresponding_oligo_setGPL14372_Probes_53327
Matching_cDNAAI989082Inferred_automaticallytranscript_builder.pl
FE939264Inferred_automaticallytranscript_builder.pl
FE931805Inferred_automaticallytranscript_builder.pl
FE941826Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_53327
RNASeq_FPKMWBls:00000324.86098From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated