WormBase Tree Display for CDS: PPA34823
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PPA34823 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 58 | |||
381 | 549 | |||||
691 | 828 | |||||
877 | 898 | |||||
905 | 1066 | |||||
1114 | 1182 | |||||
1227 | 1247 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S7-52.26 | ||
DB_remark | contains similarity to Pfam domain PF00270 (DEAD/DEAH box helicase); contains similarity to Interpro domains IPR011545 (DEAD/DEAH box helicase domain), IPR027417 (P-loop containing nucleoside triphosphate hydrolase) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
End_not_found | ||||||
Visible | Gene | WBGene00273192 | ||||
Corresponding_transcript | PPA34823.1 | |||||
Corresponding_protein | PP62365 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Method | curated |