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WormBase Tree Display for CDS: PPA34825

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Name Class

PPA34825SMapS_parentSequencePPA_ChrI
StructureSource_exons (27)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S7-52.33
DB_remarkcontains similarity to Pfam domains PF00066 (LNR domain), PF12796 (Ankyrin repeats (3 copies)); contains similarity to Interpro domains IPR002110 (Ankyrin repeat), IPR000800 (Notch domain), IPR035993 (Notch-like domain superfamily), IPR020683 (Domain of unknown function DUF3447), IPR000742 (EGF-like domain), IPR036322 (WD40-repeat-containing domain superfamily), IPR036770 (Ankyrin repeat-containing domain superfamily), IPR015943 (WD40/YVTN repeat-like-containing domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00273194
Corresponding_transcriptPPA34825.1
Corresponding_proteinPP73346
Corresponding_oligo_setGPL14372_Probes_53385
GPL14372_Probes_53386
GPL14372_Probes_53387
Microarray_resultsGPL14372_Probes_53385
GPL14372_Probes_53386
GPL14372_Probes_53387
RNASeq_FPKMWBls:00000323.74307From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010114.366From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated