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WormBase Tree Display for CDS: PPA34841

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Name Class

PPA34841SMapS_parentSequencePPA_ChrI
StructureSource_exons (14)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S7-56.26
DB_remarkcontains similarity to Pfam domains PF00561 (alpha/beta hydrolase fold), PF01812 (5-formyltetrahydrofolate cyclo-ligase family); contains similarity to Interpro domains IPR037171 (NagB/RpiA transferase-like), IPR029058 (Alpha/Beta hydrolase fold), IPR024185 (5-formyltetrahydrofolate cyclo-ligase-like domain superfamily), IPR002698 (5-formyltetrahydrofolate cyclo-ligase), IPR000073 (Alpha/beta hydrolase fold-1)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00273210
Corresponding_transcriptPPA34841.1
Corresponding_proteinPP53042
Corresponding_oligo_setGPL14372_Probes_53552
GPL14372_Probes_53553
GPL14372_Probes_53554
GPL14372_Probes_53555
Microarray_resultsGPL14372_Probes_53552
GPL14372_Probes_53553
GPL14372_Probes_53554
GPL14372_Probes_53555
RNASeq_FPKMWBls:00000327.79237From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated