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WormBase Tree Display for CDS: PPA34842

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Name Class

PPA34842SMapS_parentSequencePPA_ChrI
StructureSource_exons1126
364462
623701
11901263
16081880
DB_infoDatabasepristionchus.orgcdsgene-UMM-S7-56.28
DB_remarkPPA-RNT-1.2 protein; contains similarity to Pfam domain PF00853 (Runt domain); contains similarity to Interpro domains IPR012346 (p53/RUNT-type transcription factor, DNA-binding domain superfamily), IPR000040 (Acute myeloid leukemia 1 protein (AML1)/Runt), IPR008967 (p53-like transcription factor, DNA-binding domain superfamily), IPR013524 (Runt domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00273211
Corresponding_transcriptPPA34842.1
Corresponding_proteinPP59200
Corresponding_oligo_setGPL14372_Probes_8606
Microarray_resultsGPL14372_Probes_8606
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Methodcurated